Insertion junction: CLIP2.000339_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000339
Chromosome:chromosome 3
Location:2330223
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g158050 PPP11 (1 of 1) PF00686//PF07228 - Starch binding domain (CBM_20) // Stage II sporulation protein E (SpoIIE) (SpoIIE); Phosphoprotein phosphatase 2C-related 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACCGTCCTGAGTGGTCGTCTGTTTTAGGCGCAAACTCAACACATTGCT
Internal bar code:AGAAACTTTTTTTAGAAGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:59
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTTCAAGAGCCTCCCTG
Suggested primer 2:GGGAAGATTGGCGTTCAGGA