Insertion junction: CLIP2.000340_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000340
Chromosome:chromosome 9
Location:3188055
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394510 (1 of 1) IPR002044//IPR010989//IPR013784 - Carbohydrate binding module family 20 // t-SNARE // Carbohydrate-binding-like fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAGGGATATGGCCGTTCAGTTTGGCTGCGTCCACGGCTGCGGCGGGCA
Internal bar code:AAGAAATGTAGTTTTTTCCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:627
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCACACACACAAGACTG
Suggested primer 2:AAATGCTCATGGCCCCTGAA