Insertion junction: CLIP2.000345_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000345
Chromosome:chromosome 8
Location:2760339
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g373450 SBE4 (1 of 1) 3.2.1.141 - 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase; Starch Branching Enzyme 4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAAGCATCACAACAAAACCTGCCGGAGCATGCTTTTAGTGCCTGTGCT
Internal bar code:CATGGGCACGGATTTAGGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1176
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCTGTGATCGCAGATGC
Suggested primer 2:CTATCCAGCACGGCTCAGAG