Insertion junction: CLIP2.000348_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000348
Chromosome:chromosome 11
Location:2165602
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467737 (1 of 1) PTHR18937//PTHR18937:SF160 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTCAGGCAGCTGCGGGCCGCGCACACGGAGCTCCAGGTTTGTGAATTG
Internal bar code:AGTTTCCAACTCGTTCTTACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4044
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CATCAAAGGCGCATACCAGC
Suggested primer 2:CACGGAATGAATCACGCGTC