Insertion junction: CLIP2.000358_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000358
Chromosome:chromosome 1
Location:2830660
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g017550 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGGTGACACACACTCTATGTTCCGCCAAACCGCGAGTTACTCATGCTT
Internal bar code:TCGCTTCGAACGATTGTGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3354
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGCTGTACAATTACGCG
Suggested primer 2:GAAATTTGGCCCCAACCACC