Insertion junction: CLIP2.000360_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000360
Chromosome:chromosome 2
Location:1530567
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g084350 CGLD1,PAM71 (1 of 1) PTHR12608:SF6 - GDT1-LIKE PROTEIN 1, CHLOROPLASTIC; Mn transport across thylakoid membrane intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCGCACCGTATCTGTCTTGTCTCCGTCGTCCCTGTGTGCTGTGTCCC
Internal bar code:CTATCATCAATCGTAACGAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2301
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCAAGTCAATGGGATGGG
Suggested primer 2:GGGTTGGGTGATTGAGGAGG