Insertion junction: CLIP2.000360_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000360
Chromosome:chromosome 2
Location:1530573
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g084350 CGLD1,PAM71 (1 of 1) PTHR12608:SF6 - GDT1-LIKE PROTEIN 1, CHLOROPLASTIC; Mn transport across thylakoid membrane intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACGGCGAGCCCCGTACACACGATAGAGAGGAGAGAAAGAGAAAGAGA
Internal bar code:CTATCATCAATCGTAACGAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5022
LEAP-Seq percent confirming:98.8506
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTGGGTGATTGAGGAGG
Suggested primer 2:AGGCAAGTCAATGGGATGGG