Insertion junction: CLIP2.000363_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000363
Chromosome:chromosome 3
Location:2440286
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158950 (1 of 1) K12833 - pre-mRNA branch site protein p14 (SF3B14) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGCCCTCTGCGCCACCCTGGGTGCCCGCCGGAAGACCCAACGCCTGT
Internal bar code:TTACATTTGTTGGACAGGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:639
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACATGCATAGCTCTTGC
Suggested primer 2:CCAACGCCCAAGCAATCAAA