Insertion junction: CLIP2.000363_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000363
Chromosome:chromosome 3
Location:2440286
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158950 (1 of 1) K12833 - pre-mRNA branch site protein p14 (SF3B14) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGCTGAGGCCTCAGCTAGCACACGTGCAGAGGGCTTGCCTGGCTGCGT
Internal bar code:TTACATTTGTTGGACAGGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3362
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACGCCCAAGCAATCAAA
Suggested primer 2:GCCACATGCATAGCTCTTGC