Insertion junction: CLIP2.000382_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000382
Chromosome:chromosome 8
Location:2591787
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g373100 CYP97C3,CYP25 Cytochrome P450, CYP97 superfamily; (1 of 1) 1.14.99.45 - Carotene epsilon-monooxygenase / LUT1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGAGGGAGGGGTGGAGGAGAGGCATGTGAGCAGCAGGTAGGTACAGC
Internal bar code:GGTGATGGTGATTCGAAGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1045
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCGCGAGTGAATGCATG
Suggested primer 2:CTCACCCGTGGTCTCGTG