Insertion junction: CLIP2.000384_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000384
Chromosome:chromosome 2
Location:6177755
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g120100 RBCS1 (1 of 2) K01602 - ribulose-bisphosphate carboxylase small chain (rbcS); Ribulose-1%252C5-bisphosphate carboxylase/oxygenase small subunit 1, chloroplastic 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAGGTGGGATGGGTATCTGAGAATCAGCCAGTCAGCCGCTTCGTGGTG
Internal bar code:ATGATCTTGAGAAATGTTGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3580
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTCAGCGACTGGACTTG
Suggested primer 2:GCTTCAGCACGGAAAAGCAA