Insertion junction: CLIP2.000390_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000390
Chromosome:chromosome 2
Location:3315905
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g097800 HLA3,MRP1 (1 of 18) 3.6.3.44 - Xenobiotic-transporting ATPase / Steroid-transporting ATPase; Bicarbonate ABC transporter 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTACGGCACCAACCTTGGTTCCTTTCAGCCCCGGCCTTACTTCACCCGG
Internal bar code:TTCCTATGTCTACGCATGGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1500
LEAP-Seq percent confirming:15.3846
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:66
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCGTAATGATGGGGCAA
Suggested primer 2:GTTCGGCCAGCATGCTATTG