Insertion junction: CLIP2.000393_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000393
Chromosome:chromosome 9
Location:2082638
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396250 VTE5 Phosphatidate cytidylyltransferase; (1 of 1) K18678 - phytol kinase (VTE5) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGTTCGCACTGCGGGCAGCAGACCACACGCGGGCACAGACAGGCAGG
Internal bar code:TATGGATCAAGAGTCGCAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2651
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGGTCAAGCTCTTCGAC
Suggested primer 2:CCAGAAAGGCACAACCAAGC