Insertion junction: CLIP2.000402_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000402
Chromosome:chromosome 10
Location:2228814
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g433750 PAP1 Class-I Nucleotidyl-transferase 1, nuclear; (1 of 1) K14376 - poly(A) polymerase (PAP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTGCTGCGTGAGACAGGCCCTTCTTGTGGCCGCAGGCGCACTAGCCAC
Internal bar code:TCGGAACGGGGCATCGGGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:581
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACGCCCTTGTACTGTAG
Suggested primer 2:CCAGGAATATGCATTGCGGC