Insertion junction: CLIP2.000405_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000405
Chromosome:chromosome 12
Location:1849886
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g512300 (1 of 1) 1.13.11.58 - Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTGCGTGGGGGTGGTTGGGGCTGGATGCATGGAGCTGCCAGCGAGCA
Internal bar code:ATGTTGGGTCAGCGGGGCGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1466
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCATACCTGGTGGATGGA
Suggested primer 2:GTAATGCAATGACGTCGCCC