Insertion junction: CLIP2.000414_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000414
Chromosome:chromosome 9
Location:3194478
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394547 (1 of 3) 2.4.1.19 - Cyclomaltodextrin glucanotransferase / Cyclodextrin glycosyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAAGGGGTTTGCCACCGACGCGGCGAAACCACTAGCTCGTGCTTTACTC
Internal bar code:CTTCACCAATAACCATATATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2630
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTATGTTGGGGCAGAGGG
Suggested primer 2:ATCTGGTGGTGCAATGGAGG