Insertion junction: CLIP2.000415_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000415
Chromosome:chromosome 9
Location:4151047
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399552 LCR1 Low-CO2 response regulator, Myb-like transcription factor; (1 of 25) IPR001005//IPR009057//IPR017930 - SANT/Myb domain // Homeodomain-like // Myb domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGACAGAAGGTGGTGAGCTGAGACGTACTACAGAGCAGGAGACGCTC
Internal bar code:TAGCATGCTGTCGGGGGCAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1468
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACGTCAAGCTGGGTAAC
Suggested primer 2:GGCATCAGTGACGACGGTAT