Insertion junction: CLIP2.000425_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000425
Chromosome:chromosome 2
Location:3127722
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g096300 CIA5,CCM1 Regulator of CO2-responsive genes CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGAGCTATGGCGCCTAAAGGTCCATTATCGAGCTCCTCCGGACATTCG
Internal bar code:CGCAAACTCGGCAATGAATGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1732
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGAATTGCAGGCGGTTGAGA
Suggested primer 2:TTATGGGAGCAGGGGCAAAG