Insertion junction: CLIP2.000425_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000425
Chromosome:chromosome 2
Location:3127725
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g096300 CIA5,CCM1 Regulator of CO2-responsive genes CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCGATTGCAGCCGGGGTAACTGCGACCAACACAGCGTGGACCAGCGC
Internal bar code:GATGGGTATGCCAAGAAGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1945
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TTATGGGAGCAGGGGCAAAG
Suggested primer 2:AGAATTGCAGGCGGTTGAGA