Insertion junction: CLIP2.000465_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000465
Chromosome:chromosome 9
Location:3181091
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394473 LCI9 Low-CO2-inducible protein; (1 of 5) 3.2.1.3 - Glucan 1,4-alpha-glucosidase / Lysosomal alpha-glucosidase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCAGTTGCCTTGTGCGACTAAGCGAGCTCGCGGTGTTGTAGGATGATT
Internal bar code:CTCGCGGCTTCTACAGGACCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2945
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:AGATAGAGGCTGCCCTGTCA
Suggested primer 2:GAGATTGCGCGCTGTAACAG