Insertion junction: CLIP2.000477_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000477
Chromosome:chromosome 7
Location:3337288
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334900 (1 of 3) IPR004089 - Methyl-accepting chemotaxis protein (MCP) signalling domain outside_mRNA
Cre07.g334950 (1 of 107) PF00069//PF07714 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTCTGGGTACAGGGTACAGGGTCAGGCTGCAGGTTCAGAATCAGGTTC
Internal bar code:AACCGACTACCGGTGCGGAACC

Confirmation - LEAP-Seq

LEAP-Seq distance:4609
LEAP-Seq percent confirming:84.9557
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCTGGGGACTCGTTATC
Suggested primer 2:ACAGGCAGGTGTTCCAAACA