Insertion junction: CLIP2.000486_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000486
Chromosome:chromosome 12
Location:1853508
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g512300 (1 of 1) 1.13.11.58 - Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCGACCCCCGCCCACAGCGACACCGGCACACGGCTGGAGATCGTGGT
Internal bar code:AGATGAACTTGGGGCGTCCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1097
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTACTCACCAGCTTTGG
Suggested primer 2:CGTGATCTAGCGCCAAAAGC