Insertion junction: CLIP2.000500_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000500
Chromosome:chromosome 6
Location:933952
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256250 TEF14 Thylakoid lumenal protein; (1 of 1) PTHR35742//PTHR35742:SF1 - FAMILY NOT NAMED // THYLAKOID LUMENAL 16.5 KDA PROTEIN, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTAACACATTCAACGGCACTTCATGGACGCATTACATGGCTCTATTGGC
Internal bar code:GGAGCGCCTTGCGCACAGCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2719
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTTTGGGTGAGGCTTGT
Suggested primer 2:CTTCGCCGCCTTTGATGATG