Insertion junction: CLIP2.000506_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000506
Chromosome:chromosome 2
Location:8229652
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g143635 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCATGGCATACCCCCACGCTCCTCCCTGGTCCGCGGCGCAGTCATAAC
Internal bar code:GGGGGCTTATCACATTAAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1468
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTGATGTAGTGGGCGCGATA
Suggested primer 2:GCAGCCACACAGCAAATCAA