Insertion junction: CLIP2.000510_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000510
Chromosome:chromosome 6
Location:4273292
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278255 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGACCAACAACCGCCCCGTCGCAGGTCTTTCGTGACGGCGCACGAACGC
Internal bar code:GTTATATTACCATATTAGATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1389
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTATGCCTGCTCCCCTCT
Suggested primer 2:TTGAAGATGGAGTTGGGGCC