Insertion junction: CLIP2.000515_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000515
Chromosome:chromosome 12
Location:5671544
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531900 FLVA,FLVA1 (1 of 2) 1.5.3.22 - Coenzyme F420H(2) oxidase; Thylakoid flavodiiron protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGGTAGTGCAGCACGGAGCGGTAGTGCAGCACGGTAGTGTTGCCTTA
Internal bar code:ATCATAAAAATCGGATGTCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:984
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GATATGCTGCAACGGCTGTG
Suggested primer 2:TTAGAGGCTCAGCGAGGTCT