Insertion junction: CLIP2.000523_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000523
Chromosome:chromosome 7
Location:5540746
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351650 BUG22,FAP20 Transcription Factor 2-Like Flagellar Associated Protein 20; (1 of 3) PF05018 - Protein of unknown function (DUF667) (DUF667) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATCTGTAACCCACAGCGCTGGCAAACGCTGTCGCTCCTCCGCCTCCTG
Internal bar code:ATTGTAGAGACTTTAAGTGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3049
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTTAAGCCGTTCATCTG
Suggested primer 2:GGCCAGACATACTCTCAGCC