Insertion junction: CLIP2.000529_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.000529
Chromosome:chromosome 7
Location:2874744
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g332300 GWD2,1 Alpha-glucan water dikinase 2; (1 of 3) 2.7.9.4 - Alpha-glucan, water dikinase / Starch-related R1 protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGGATGGAGGGGTGGAAGGGGTGGGGTTGGCGGAACTCCAGGCAAGG
Internal bar code:TTTCGAATCAATTGGAGGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:824
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTGCCTGTTGTGTCTCT
Suggested primer 2:ATTCTGCACACACCTCCTCG