Insertion junction: CLIP2.000534_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000534
Chromosome:chromosome 3
Location:4129738
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172700 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCACCCCGGCACCCGCCCTTGCGGCAGGGGTTGGGCCACAGCGGCCTT
Internal bar code:AATGGGATCGGTAGGTCAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1789
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGAGATGCATCGTCTGTA
Suggested primer 2:GCAGCTGATGGTTTATGGCG