Insertion junction: CLIP2.000536_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000536
Chromosome:chromosome 14
Location:1322405
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g616600 FZL,FZL1 Plastid-localized; (1 of 1) PTHR11649//PTHR11649:SF36 - MSS1/TRME-RELATED GTP-BINDING PROTEIN // FZL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACAAAGCCAGGAACAGTAAACCAGGAGCCCGGGATGCTGGCACAAATA
Internal bar code:GTTTTCAGACACATAAAGGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1575
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAATCACATGTTCGCGCG
Suggested primer 2:GGAAGTTGGACACGTTTCGC