Insertion junction: CLIP2.000541_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.000541
Chromosome:chromosome 9
Location:6507322
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g415600 (1 of 5) 3.2.1.3 - Glucan 1,4-alpha-glucosidase / Lysosomal alpha-glucosidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCTCTGCCGCGCCTAGGACTCCGTCATGAAGCCGAAGCACTTGAGTTG
Internal bar code:AGGCTGACTCGCTTGCGAACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2443
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GGTACCGTTCTGGACACGTT
Suggested primer 2:TGTTATTGTTGCGGTGCTGC