Insertion junction: CLIP2.000542_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000542
Chromosome:chromosome 3
Location:5384148
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g183550 (1 of 3) PTHR15160//PTHR15160:SF4 - VON HIPPEL-LINDAU PROTEIN // PROTEIN F23H11.5 3'UTR
Cre03.g183600 (1 of 1) PF15375 - Domain of unknown function (DUF4602) (DUF4602) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACAGATTAGATGAACAGGTCAAGCGGCGAAAGGATGCCGAGGAAAGGC
Internal bar code:TATGGTGACTTGGGTGTTTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5151
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCGTTCAAAACCACAGGG
Suggested primer 2:GAGAGCGCGTCCCTAGTAAC