Insertion junction: CLIP2.000546_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000546
Chromosome:chromosome 6
Location:4269394
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278255 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTTCGATTTGCTTTGGGCCGGCATCTACAACCCCCGTCCCCACCTCC
Internal bar code:TAGTATTTTGTTTAGTAATTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:179
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCGAGGGATGGGTTTAAA
Suggested primer 2:TGTGGGCATGTGCAAATGTG