Insertion junction: CLIP2.000562_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000562
Chromosome:chromosome 9
Location:3529328
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396438 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGGCATATGCACCAAGACCACCTTGCGATCCGGCAGGGGTGCCCGAA
Internal bar code:GATTTTATACGCGAATCTGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:221
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGTGCTGCTCAACAACC
Suggested primer 2:GTACTCGCGCAGGAGCTTAT