Insertion junction: CLIP2.000566_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000566
Chromosome:chromosome 3
Location:7354936
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206550 CPLD2,PGP5 (1 of 2) PTHR18901//PTHR18901:SF9 - 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2 // SUBFAMILY NOT NAMED; conserved expressed protein with hydrolase motif 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTCAAGCCCACTCGCTCTCCCATCCACTGTCCCATCGCACGCCCTCTC
Internal bar code:TAGTGAGCCCTCCTCGGAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2033
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCACCTCACCTTCTCCTG
Suggested primer 2:TGTATTTGGTTGTGGGGCGT