Insertion junction: CLIP2.000573_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000573
Chromosome:chromosome 2
Location:8229149
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g143635 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATTTAAGACGAAAAGAGGTTCGGTGGGTTCGCCATGTCAGGCCGTGTC
Internal bar code:CGTTCCACAACAACTTTGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2333
LEAP-Seq percent confirming:80.5556
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTCACCCATGCATCAGT
Suggested primer 2:CCCGTTTCCAAGCACTGTTG