Insertion junction: CLIP2.000580_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000580
Chromosome:chromosome 16
Location:928763
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648400 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATACATCACCCCAGCGACCAACCAACACCATGCCTACCCAGACATACCT
Internal bar code:TCCATTGACTTTCGTATGGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:947
LEAP-Seq percent confirming:64.7059
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGGAGTCTCCCCTCTTCA
Suggested primer 2:CACTCTTCTCAGCAGCGTCA