Insertion junction: CLIP2.000581_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000581
Chromosome:chromosome 3
Location:4129778
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172700 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACGTCTCTCTTCGTGCCTGCCTCATTGCACCCCACGAGTTCACCCCG
Internal bar code:GGATCCGGCCTCATGTGCAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4123
LEAP-Seq percent confirming:12.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGAGATGCATCGTCTGTA
Suggested primer 2:GCAGCTGATGGTTTATGGCG