Insertion junction: CLIP2.000589_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000589
Chromosome:chromosome 3
Location:8358472
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g199000 PHOT,PHT1,PHOT1 (1 of 1) PTHR24351//PTHR24351:SF76 - RIBOSOMAL PROTEIN S6 KINASE // PROTEIN TWIN LOV 1; Phototropin 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGCGCCTCGGCGAGGACGGCCGCTTGCCGACGGCGCGCCCCGCTGCT
Internal bar code:CTTCGCTGCATTGCTAGTCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2422
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGGGAGGATAAGGAGCCA
Suggested primer 2:CTTGCGGCATACTTTCGTCG