Insertion junction: CLIP2.000596_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000596
Chromosome:chromosome 9
Location:6685422
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g416800 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCGCGTCTTCGCCTGCGCAGATGTAAACAGATGTCGAGTCTGCTCAGT
Internal bar code:AGGAAGTTCATACTTCGGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2958
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGCATGCATTGGGGTCAT
Suggested primer 2:CATGTCCATCCGAGGAGACG