Insertion junction: CLIP2.000601_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000601
Chromosome:chromosome 9
Location:6504101
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g415550 OPR43,ASA2 Mitochondrial F1F0 ATP synthase associated protein 2 3'UTR_intron
Cre09.g415600 (1 of 5) 3.2.1.3 - Glucan 1,4-alpha-glucosidase / Lysosomal alpha-glucosidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGCGGTCCTGTTCTGAGACTTCAGTCACACACGGGATCCTGTCCATC
Internal bar code:GGAAAGAAATGTGAGCTCAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:776
LEAP-Seq percent confirming:23.0769
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTCAGGATCTCACCCCAT
Suggested primer 2:CTCTGGTTGGACAGATGCGT