Insertion junction: CLIP2.000609_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000609
Chromosome:chromosome 12
Location:4036287
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g516300 CGL154 Conserved in the Green Lineage; (1 of 11) PF13229 - Right handed beta helix region (Beta_helix) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCACGCCAGCCTGCAGGAAGCAGACGTGTGTTGCGGTCCAGGAAAGCA
Internal bar code:AGATGCGGTGCCAGTCCACTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1564
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGCACCGGTATCAACTT
Suggested primer 2:AGGGAGGTGTTGAGATTGCG