Insertion junction: CLIP2.000618_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000618
Chromosome:chromosome 12
Location:5692945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532100 CTAP3 Chloroplast translocon associated protein 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCATAAGACAAGCATATATCTGAGCAACAGTGACAATGGGCGGTCGCC
Internal bar code:ATCTCATGACTATATTCCGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1476
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCAACATCCTGTCGTGTA
Suggested primer 2:GCATAGCCGTGCTACTGGAT