Insertion junction: CLIP2.000618_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000618
Chromosome:chromosome 12
Location:5692952
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532100 CTAP3 Chloroplast translocon associated protein 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGATAAACTCATCAAGATTTGCTCAGGACGAGGAATGAAGTTATCATC
Internal bar code:GAACTGTTGGAGCTAAAACCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1277
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCATAGCCGTGCTACTGGAT
Suggested primer 2:GCCCAACATCCTGTCGTGTA