Insertion junction: CLIP2.000621_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000621
Chromosome:chromosome 2
Location:2723206
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g093650 (1 of 1) 1.14.12.22 - Carbazole 1,9a-dioxygenase / CARDO outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGACTTGCAACTTGGCCGTGCAACTTCTGAGAGCCGCCCTCCACGAGGG
Internal bar code:TTCACTGCAGATAACTAGCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2179
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGCGACATTGAGGTCAAT
Suggested primer 2:ATATGCGGTGTTGGCACTCA