Insertion junction: CLIP2.000628_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000628
Chromosome:chromosome 2
Location:5130517
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111550 (1 of 1) IPR000104//IPR000719//IPR001229//IPR002290//IPR011009//IPR020635 - Antifreeze protein, type I // Protein kinase domain // Jacalin-like lectin domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCAACACGGACGCTGCCGCATCGGCGGCGGCCGCCGCCGGCGGCCGTG
Internal bar code:AGCGAGTACTTGCCCCTGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2001
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGCTGATGGTCTTCGTT
Suggested primer 2:CGATCTCGCTGTAGGTCCAC