Insertion junction: CLIP2.000630_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000630
Chromosome:chromosome 1
Location:5612431
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g040050 TPK1 (1 of 1) K00949 - thiamine pyrophosphokinase (thiN, TPK1, THI80); Thiamine pyrophosphokinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGGAGGTGGCAGTGGGAAGGTTGTGATGACGAGGCGCTAGAGAATAGA
Internal bar code:GTTTTGCTCCACAATAGATCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1304
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TCTAGCCATCACACTCGGGA
Suggested primer 2:TGCAGTGCAACGATGAGAGT