Insertion junction: CLIP2.000632_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000632
Chromosome:chromosome 6
Location:4271930
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278255 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAAAGATGCAGTCAAGTAGGGGGTTGGGGTGAAGCGGTGAAGGATGTT
Internal bar code:ATTTCTTGGCGCGCGGATCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1184
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGGGGAGCAGGCATAAGA
Suggested primer 2:TATGGCCCAAGAGTCGAGGA