Insertion junction: CLIP2.000637_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000637
Chromosome:chromosome 2
Location:1496248
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g084000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACGCCCACGCCTTGCGCTCCTCGATCCGGGAGTTTTGACCCTGTCCC
Internal bar code:CGGGCTAGTGCGTAAGCACCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1229
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTTTGCCGGTGTTTTGC
Suggested primer 2:CGGGCTCACCTTGAACTCTT