Insertion junction: CLIP2.000638_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000638
Chromosome:chromosome 2
Location:1529063
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g084350 CGLD1,PAM71 (1 of 1) PTHR12608:SF6 - GDT1-LIKE PROTEIN 1, CHLOROPLASTIC; Mn transport across thylakoid membrane 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGCACGTGCACGTGTAACGCCTGGACACCTAACCCCGGAACAGGCTA
Internal bar code:TAGGAGTGATCATTAATCGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3110
LEAP-Seq percent confirming:84.058
LEAP-Seq n confirming:116
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:138

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTCTGCCGTGTGTTTTG
Suggested primer 2:GTGACAAGTCCTTCCTCGCA